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WEBINAR ENDED
· 30 minutes

One pixel to many objects mapping for nuclear segmentation and marker evaluation in spatial biology

Friday, October 18, 2024 · 5:30 p.m. · Rome
About This Webinar

In microscopy images of tissue sections, we are trying to delineate overlapping semi-transparent objects of random sizes and shapes, a technically demanding task that even human annotators find challenging to do repeatably. Segmentation models that explicitly allow for overlap such as our developed Sequential UNet generates a potentially more realistic segmentation representation of the tissue. We show how this can improve the information one can extract from DNA specifically stained nuclei on a large lung cancer TMA (~800 spots). We will present how a one to many mapping could potentially improve marker evaluation from overlapping cells in spatial biology.

Who can view: Everyone
Webinar Price: Free
Featured Presenters
Webinar hosting presenter
Distinguished Scientist, British Columbia Cancer Research Institute
Dr. Calum MacAulay’s research has concentrated on the early detection and treatment of cancer using quantitative imaging tools in microscopy, photon - tissue interactions and understanding the neoplastic process. The teams he works with have a strong drive to translate their work resulting in clinically adapted tools using tissue autofluorescence for the detection and assessment of lung and oral cancers as well as automated image cytometry systems for cervical screening and oral cancer screening.
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